Fusarium
head blight (FHB), a devastating disease of barley caused primarily by the
fungus Fusarium graminearum, can cause significant yield losses and
grain contamination with mycotoxins. Enhancing genetic resistance to FHB and
the resultant accumulation of mycotoxins is one of the most effective and
economical methods of reducing losses caused by FHB. Our future objective is to
develop a multi-parent advanced generation intercross (MAGIC) population using
the most resistant two-rowed barley accessions possessing complementary
haplotypes at characterized FHB/DON loci with the goal of identifying progeny
with resistance enhanced beyond the level of the founder parents. A panel of
247 diverse barley accessions from world-wide collections previously observed
to exhibit promising levels of FHB resistance was evaluated in up to 10
environments over the past six years at two locations in Minnesota. The panel
was genotyped using the 50k Infinium iSelect genotyping array for barley and
association mapping was performed to identify quantitative trait loci (QTL)
controlling FHB severity and deoxynivalenol (DON) concentration. Multiple FHB
and DON QTL were detected, notably independent of QTL influencing heading date,
plant height, and row type. These significant marker-trait associations were
used to generate multi-marker haplotypes in relevant genomic regions.
Haplotype-trait associations were then tested using the haplo.stats package in
R. A group of 21 two-rowed candidate parents was selected based on FHB and DON
phenotypes, as well as key agro-morphological traits including heading date and
plant height. The R package PopVar was used to predict genetic variance and
superior progeny means for simulated biparental populations for all parental
combinations of the 21 selected lines. Utilizing the predicted cross means and
variances, as well as the haplotype information for the selected lines, eight
parents were selected to serve as the founders for the multi-parent advanced
generation intercross (MAGIC) population. Three of the eight founder parents
are agronomically advanced lines, which will increase the chances of recovering
progeny with desirable agronomic and quality traits beyond resistance to FHB
and the accumulation of DON. Over the next three years, additional intercrosses
and selfing generations will be performed to generate 800-1000 recombinant
inbred lines (RILs) that will be phenotyped for disease reaction and mycotoxin
concentration in multiple environments. Progeny carrying novel combinations of
alleles from multiple founder parents at key haplotype loci are expected to
have enhanced resistance to FHB and DON accumulation.